pymem3dg.boilerplate.prescribeGeodesicProteinDensityDistribution

pymem3dg.boilerplate.prescribeGeodesicProteinDensityDistribution(time: float, vertexMeanCuravtures: ndarray[Any, dtype[float64]], geodesicDistance: ndarray[Any, dtype[float64]], sharpness: float, radius: float)

form function that prescribe geodesic protein density profile on mesh

Parameters:

  • time (float) – time of the system

  • vertexMeanCuravtures (npt.NDArray[np.float64]) – vertex mean curvature

  • geodesicDistance (npt.NDArray[np.float64]) – vertex geodesic curvature

  • sharpness (float) – sharpness of transition used in tanh function

  • radius (float) – center of transition of the tanh function

Returns:

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Return type:

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