pymem3dg.visual.plotChemicalPotentials

pymem3dg.visual.plotChemicalPotentials(ax, trajFile, parameters, logScale=False, frames=None, spontaneousCurvaturePotential=False, adsorptionPotential=False, dirichletPotential=False, deviatoricCurvaturePotential=False, aggregationPotential=False, entropyPotential=False)

plot (components of) chemical potential

Parameters:

• ax (matplotlib.axes.Axes) – matplotlib Axes instance

• trajFile (str) – netcdf trajectory file

• parameters (pymem3dg.Parameters) – pymem3dg Parameters instance

• logScale (bool, optional) – if adopt log scale. Defaults to False.

• frames (array, optional) – list of frames to plot. Defaults to all frames in trajectory file

• spontaneousCurvaturePotential (bool, optional) – option to visualize components, default to False

• adsorptionPotential (bool, optional) – option to visualize components, default to False

• dirichletPotential (bool, optional) – option to visualize components, default to False

• deviatoricCurvaturePotential (bool, optional) – option to visualize components, default to False

• aggregationPotential (bool, optional) – option to visualize components, default to False

• entropyPotential (bool, optional) – option to visualize components, default to False