pymem3dg.visual.plotMechanicalForces

pymem3dg.visual.plotMechanicalForces(ax, trajFile, parameters, logScale=False, frames=None, spontaneousCurvatureForce=False, capillaryForce=False, externalForce=False, osmoticForce=False, adsorptionForce=False, aggregationForce=False, entropyForce=False, springForce=False, lineCapillaryForce=False)

Plot (components of) mechanical forces

Parameters:

  • ax (matplotlib.axes.Axes) – matplotlib Axes instance

  • trajFile (str) – trajectory file name

  • parameters (pymem3dg.Parameters) – pymem3dg Parameters instance

  • logScale (bool, optional) – if adopt log scale. Defaults to False.

  • frames (list, optional) – list of frames to plot. Defaults to all frames in trajectory file

  • spontaneousCurvatureForce (bool, optional) – option to visualize components. Default to False

  • capillaryForce (bool, optional) – option to visualize components. Default to False

  • externalForce (bool, optional) – option to visualize components. Default to False

  • osmoticForce (bool, optional) – option to visualize components. Default to False

  • adsorptionForce (bool, optional) – option to visualize components. Default to False

  • aggregationForce (bool, optional) – option to visualize components. Default to False

  • entropyForce (bool, optional) – option to visualize components. Default to False

  • springForce (bool, optional) – option to visualize components. Default to False

  • lineCapillaryForce (bool, optional) – option to visualize components. Default to False