Mem3DG
0.0.7rc1
API Documentation:
Python API Reference
pymem3dg._core
Adsorption
Aggregation
Bending
Boundary
ConjugateGradient
DPD
Dirichlet
Energy
Energy
pymem3dg._core.Energy.__init__
pymem3dg._core.Energy.adsorptionEnergy
pymem3dg._core.Energy.aggregationEnergy
pymem3dg._core.Energy.areaDifferenceEnergy
pymem3dg._core.Energy.deviatoricCurvatureEnergy
pymem3dg._core.Energy.dirichletEnergy
pymem3dg._core.Energy.edgeSpringEnergy
pymem3dg._core.Energy.entropyEnergy
pymem3dg._core.Energy.externalWork
pymem3dg._core.Energy.faceSpringEnergy
pymem3dg._core.Energy.kineticEnergy
pymem3dg._core.Energy.lcrSpringEnergy
pymem3dg._core.Energy.potentialEnergy
pymem3dg._core.Energy.pressureEnergy
pymem3dg._core.Energy.proteinInteriorPenalty
pymem3dg._core.Energy.spontaneousCurvatureEnergy
pymem3dg._core.Energy.surfaceEnergy
pymem3dg._core.Energy.totalEnergy
Entropy
Euler
External
Forces
Geometry
MeshMutator
MeshProcessor
Osmotic
Parameters
Point
Protein
SelfAvoidance
System
Tension
Variation
VelocityVerlet
spring
pymem3dg._core.getCylinder
pymem3dg._core.getData
pymem3dg._core.getDataElementName
pymem3dg._core.getDataPropertyName
pymem3dg._core.getDiamond
pymem3dg._core.getFaceAndVertexMatrix
pymem3dg._core.getFaceSurfacePointClosestToEmbeddedCoordinate
pymem3dg._core.getHexagon
pymem3dg._core.getIcosphere
pymem3dg._core.getTetrahedron
pymem3dg._core.getVertexClosestToEmbeddedCoordinate
pymem3dg._core.getVertexFurthestFromBoundary
pymem3dg._core.linearSubdivide
pymem3dg._core.loopSubdivide
pymem3dg._core.processSoup
pymem3dg._core.startProfiler
pymem3dg._core.stopProfiler
pymem3dg.util
pymem3dg.boilerplate
pymem3dg.visual
Mem3DG
Python API Reference
pymem3dg._core
Energy
pymem3dg._core.Energy.proteinInteriorPenalty
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pymem3dg._core.Energy.proteinInteriorPenalty
¶
property
Energy.
proteinInteriorPenalty
¶
get protein interior penalty energy (numerical energy)