SMART modules#
General functions: array manipulation, data i/o, etc |
Configuration settings for simulation: logger formatting, solver configuration, other flags |
Classes for parameters, species, compartments, reactions, fluxes, and forms. |
SMART module interfacing with PETSc SNES solver |
Functions associated with the SMART model class |
Wrapper around dolfin mesh class to define parent and child meshes for SMART simulations. |
Pint registry from SMART and related convenience function |
Functions to create meshes for demos. |
Utility functions for visualizing SMART meshes using pyvista. |